Monday 1 July8:30-9:30 Registration and welcome Session 1: Origin of life and synthetic biology9:30 - 10:30 Invited talk: Wim Hordijk (SmartAnalytiX.com) Autocatalytic Sets and the Origin of Life Please visit this page for the abstract of the talk. 10:30 - 11:00 Coffee break 11:00 - 11:30 Welcome by the Dean of the University of Milan Bicocca and by the chairs of UCNC and CiE. 11:30 - 12:00 Chiara Damiani, Alessandro Filisetti, Alex Graudenzi, Marco Villani and Roberto Serra Recent developments in research on catalytic reaction networks 12:00 - 12:20 Roberto Serra, Alessandro Filisetti, Alex Graudenzi, Chiara Damiani and Marco Villani A model of protocell based on the introduction of a semi-permeable membrane in a stochastic model of catalytic reaction networks 12:20 - 12:50 Giordano Rampioni, Luisa Damiano, Marco Messina, Francesca D'Agnelo, Livia Leoni and Pasquale Stano Chemical communication between synthetic and natural cells: a possible experimental design 12:50 - 14:15 Lunch (not provided) 14:15 - 14:45 Alessandro Fontana and Borys Wròbel Evolution and development of complex computational systems using the paradigm of metabolic computing in Epigenetic Tracking 14:45 - 15:15 Sebastiano de Franciscis and Alberto D'Onofrio Bounded noise-controlled evasion of tumors from immune system control 15:15 - 15:45 Coffee break 15:45 - 16:05 Daniele Ramazzotti, Carlo Maj and Marco Antoniotti A Model of Colonic Crypts using SBML Spatial 16:05 - 16:25 Giulio Caravagna, Alex Graudenzi, Marco Antoniotti and Giovanni De Matteis Analysis of the spatial and dynamical properties of a multiscale model of intestinal crypts 16:25 - 16:55 Gianfranco Minati, Ignazio Licata and Eliano Pessa Meta-Structures: The Search of Coherence in Collective Behaviours without Physics 16:55 - 17:15 (Open) round table on possible new initiatives and projects. 19:00 - 20:00 Aperitif at Colonne di San Lorenzo (optional) 20:00 - (late) night Social dinner The social dinner will take place at the Antica Hostaria della Lanterna, Via Mercalli, 3, 20122 Milano, Italia. | Tuesday 2 July8:30-9:30 Registration 9:30 - 10:30 Invited talk: Alberto D'Onofrio (IEO, European Institute of Oncology) The role of extrinsic bounded noises in Systems Biology, and their interplay with intrinsic stochasticity 10:30 - 11:00 Coffee break 11:00 - 11:30 Andrea Maggiolo Schettini, Paolo Milazzo and Giovanni Pardini Application of a Semi-automatic Algorithm for Identification of Molecular Components in SBML Models 11:30 - 11:50 Domenico Fraccalvieri, Laura Bonati and Fabio Stella Self Organizing Maps to efficiently cluster and functionally interpret protein conformational ensembles 11:50 - 12:10 Daniela Besozzi, Giulio Caravagna, Paolo Cazzaniga, Marco Nobile, Dario Pescini and Alessandro Re GPU-powered Simulation Methodologies for Biological Systems 12:10 - 12:30 Chiara Damiani, Riccardo Colombo, Sara Molinari, Dario Pescini, Daniela Gaglio, Marco Vanoni, Lillia Alberghina and Giancarlo Mauri An ensemble approach to the study of the emergence of metabolic and proliferative disorders via Flux Balance Analysis Session 4: Bioinspired and evolutionary computation 12:30 - 12:50 Gianluca Colombo, Ettore Colombo and Andrea Bonomi Semi-structured data extraction and modelling: the case of Spreadsheets 12:50 - 14:10 Lunch (not provided) 14:10 - 14:40 Emanuele Massaro, Andrea Guazzini, Franco Bagnoli and Henrik Olsson Impact of local information in growing networks 14:40 - 15:10 Andrea Gaetano Citrolo and Giancarlo Mauri An Hybrid Monte Carlo Ant Colony Optimization Approach for Protein Structure Prediction in the HP Model 15:10 - 15:30 Simone Righi and Karoly Takacs Signed Networks, Triadic Interactions and the Evolution of Cooperation 15:30 - 16:00 Coffee break 16:00 - 17:00 Invited talk: Enrico Formenti (Université de Nice-Sophia Antipolis, joint invited speaker with UCNC 2013) Asymptotic Dynamics of (Some) Asynchronous Cellular Automata Please visit this page for the abstract of the talk. |